Tools

SAT, SSR Analysis Tool, a web-based pipeline conceived to analyse sequences obtained from SSR (Simple Sequence Repeat) enriched libraries.

Banana

INIBAP databases : International Network for the Improvement of Banana and Plantain

MGIS : Musa Germplasm Information System

Sugarcane:

BSES : Bureau of Sugar Experiment Stations

CERF : Centre d'Essai, de Recherche et de Formation, la Réunion, France

Copersucar, Brazil

MSIRI : Mauritius Sugar Industry Research Institute

SASEX : The South African Sugar Association Experiment Station

Cocoa

CocoaGenDB : The New International Genetic Cocoa Database

CacaoNet : Global Cacao Genetic Resources Network

GRIN : Germplasm Resources Information Network, developed and maintained by USDA.
An automated data retrieval system for the collection and dissemination of germplasm information, including the cacao accessions which have passed through the USDA quarantine system.

ICGD : The International Cocoa Germplasm Database

Coconut

CGRD : Coconut Genetic Resources Database

Coffee

ICGN : International Coffee Genome Network

Cotton

Cotton DB : The cotton data base website

The Plant Genome Mapping Laboratory, PGML, Center for applied genetic technology, University of Georgia

The Cotton Microsatellite database, CMD, Clemson University Genomics Institute

The Cotton Center, Clemson University Genomics Institute

The Cotton functional genomics center, CGC, University Davis, California

The portal of the International Cotton Genome Initiative, ICGI

Rice

OryGenesDB : an interactive tool for Rice reverse genetics

IRRI : The International Rice Research Institute

Gramene : A Comparative Mapping Resource for Grains

Oryzabase : Rice Genetic Resource in Japan

RGP : Rice Genome Research Program

TIGR : The Institute for Genomic Research Rice Genome Project

4th international Rice Functional Genomics Meeting , from October 9th to 11th 2006, Montpellier, France

Sorghum

Sorghum DB

Various Crop

Generation Challenge Programme

UK Cropnet : The UK Crop Plant Bioinformatics Network

BRG : Genetic Resources Board

 

 

 

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