Data origin
The data (map and QTL) included in the cotton module of TropGENE DB have been
obtained:
by Cirad teams in Montpellier for the mapping data of Guazuncho 2 x VH8
(BC1, BC2, RILs and consensus BC1+RIL) in various publications (see
references)
by Andrew H Paterson group (Plant Genome Mapping Laboratory, University of
Georgia), for the mapping data of palmeri x K101 (results detailed in Rong et
al, Genetics, 2004, 166:389-41 ; Rong et al, Genetics, 176:2577-2588.
by Mauricio Ulloa group (USDA-ARS, Cotton Enhancement Program, Shafter, CA) and
Russel Kohel groups (USDA-ARS, Crop Germplasm Unit, College station, TX), for
the mapping data of TM1 x 3-79 (results detailed in Frelichowski et al, Molecular
Genetics and Genomics, 2006, 275: 479-491)
by Tianzhen Zhang group (National Key Lab of Crop Genetic & Germplasm
Ehancement and Cotton Research Institute College of Agriculture, Nanjing
Agricultural University, Nanjing, China) for the mapping data of TM1 x Hai7124
- BC1 (results detailed in Guo et al. BMC Genomics 2008(9):314.
by Xianlong Zhang group (National Key Lab of Crop Genetic Improvement, Huazhong
Agricultural University, Wuhan, China) for the mapping data of CRI36 x
Hai7124-F2 (results detailed in Yu et al, J Integ Plant Biology, 2007, 49(5):
716-724) and of Emian2 x Pima 3-79-BC1 (results detailes in Yu et al. BMC
Genomics 2011, 12(1):15).
by collaborative projects involving Cirad and other institutions:
→ RFLP probes on Cirad map where kindly provided by AH Paterson (Plant Genome Mapping Laboratory, University
of Georgia, USA)
→ Arabidopisis thaliana (markers with prefix "At") probes were developed within the European Eudicot Mapping
project (EuDiCot)
→ all microsatellites with prefix "CIR", were developed within a collaborative project between Cirad and the "Centre National de Séquençage, Génoscope" of Evry (France)
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